Type: Package
Package: DiffCorr
Title: Analyzing and Visualizing Differential Correlation Networks in
        Biological Data
Version: 0.4.5
Date: 2025-06-08
Authors@R: c(
    person("Atsushi", "Fukushima", , "afukushima@gmail.com", role = c("aut", "cre")),
    person("Kozo", "Nishida", , "kozo.nishida@gmail.com", role = "aut")
  )
Description: A method for identifying pattern changes between 2
        experimental conditions in correlation networks (e.g., gene
        co-expression networks), which builds on a commonly used
        association measure, such as Pearson's correlation coefficient.
        This package includes functions to calculate correlation
        matrices for high-dimensional dataset and to test differential
        correlation, which means the changes in the correlation
        relationship among variables (e.g., genes and metabolites)
        between 2 experimental conditions.
License: GPL-3
Depends: R (>= 3.5.0), fdrtool, igraph, multtest, pcaMethods
Imports: graphics, grDevices, stats, utils
Suggests: knitr, prettydoc, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
Encoding: UTF-8
Language: en-US
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2026-07-03 08:43:51 UTC; root
RoxygenNote: 7.3.2
Config/pak/sysreqs: libglpk-dev libxml2-dev
Repository: https://afukushima.r-universe.dev
Date/Publication: 2025-06-08 04:28:03 UTC
RemoteUrl: https://github.com/afukushima/diffcorr
RemoteRef: HEAD
RemoteSha: ed6c7f6ddd500a79c6540f01c3718cf9c793cc34
Author: Atsushi Fukushima [aut, cre],
  Kozo Nishida [aut]
Maintainer: Atsushi Fukushima <afukushima@gmail.com>